RNDr. Terézia Slanináková

2025

• GROMACS MetaDump

  ROŠINEC Adrián SLANINÁKOVÁ Terézia PAVLÍK Tomáš RANDIAK Róbert SVOBODA Tomáš RAČEK Tomáš BUČEKOVÁ Gabriela SCHINDLER Ondřej ANTOL Matej KŘENEK Aleš BERKA Karel SVOBODOVÁ Radka

  Software

  Year: 2025

• Gromacs MetaDump: a tool for extracting GROMACS simulation metadata

  ROŠINEC Adrián SLANINÁKOVÁ Terézia PAVLÍK Tomáš RANDIAK Róbert SVOBODA Tomáš RAČEK Tomáš BUČEKOVÁ Gabriela SCHINDLER Ondřej ANTOL Matej KŘENEK Aleš BERKA Karel SVOBODOVÁ Radka

  Article in Periodical

  Journal of Cheminformatics, year: 2025, volume: 17, edition: 1, DOI

• Introducing a new adaptive look-up table subset selection method for leaf chlorophyll and carotenoids retrieval in broadleaved forests

  SLANINÁKOVÁ Terézia ŠVIK Marian REBOK Tomáš HANOUSEK Tomáš JANOUTOVÁ Růžena

  Article in Periodical

  Remote Sensing Letters, year: 2025, volume: 16, edition: 6, DOI

• On the Costs and Benefits of Learned Indexing for Dynamic High-Dimensional Data

  SLANINÁKOVÁ Terézia OĽHA Jaroslav PROCHÁZKA David ANTOL Matej DOHNAL Vlastislav

  Article in Proceedings

  Big Data Analytics and Knowledge Discovery 27th International Conference, DaWaK 2025, Bangkok, Thailand, August 25–27, 2025, Proceedings, year: 2025

• On the Costs and Benefits of Learned Indexing for Dynamic High-Dimensional Data: Extended Version

  SLANINÁKOVÁ Terézia OĽHA Jaroslav PROCHÁZKA David ANTOL Matej DOHNAL Vlastislav

  Research report

  Year: 2025

• Refining Structure-Based Search in AlphaFold DB: Including confidence metrics into AlphaFind

  SLANINÁKOVÁ Terézia MARŠÁLKOVÁ Eva GREŠOVÁ Katarína KŘENEK Aleš OĽHA Jaroslav PAVLÍK Tomáš ŠPRINGEROVÁ Pavlína SEHNAL David ANTOL Matej

  Conference abstract

  Year: 2025, type: Conference abstract

• Scaling Learned Metric Index to 100M Datasets

  PROCHÁZKA David SLANINÁKOVÁ Terézia ČERŇANSKÝ Jozef OĽHA Jaroslav ANTOL Matej DOHNAL Vlastislav

  Article in Proceedings

  SIMILARITY SEARCH AND APPLICATIONS, SISAP 2024, year: 2025

2024

• 3D-af-Surfer: Protein structural embeddings of AlphaFold DB

  NOVOTNÁ Lucie SLANINÁKOVÁ Terézia PROCHÁZKA David HEJTMÁNEK Lukáš ROŠINEC Adrián OĽHA Jaroslav GREŠOVÁ Katarína DOHNAL Vlastislav ANTOL Matej

  Specialized database

  Year: 2024, type: Specialized database

• 3DZD: Protein structural embeddings of AlphaFold DB v4

  NOVOTNÁ Lucie SLANINÁKOVÁ Terézia PROCHÁZKA David HEJTMÁNEK Lukáš ROŠINEC Adrián OĽHA Jaroslav GREŠOVÁ Katarína DOHNAL Vlastislav ANTOL Matej

  Specialized database

  Year: 2024, type: Specialized database

• 3DZD: Protein structural embeddings of ESM Atlas

  NOVOTNÁ Lucie SLANINÁKOVÁ Terézia PROCHÁZKA David HEJTMÁNEK Lukáš ROŠINEC Adrián OĽHA Jaroslav GREŠOVÁ Katarína DOHNAL Vlastislav ANTOL Matej

  Research and development projects

  Year: 2024, type: Research and development projects